scATAC-seq data integration • Signac
Fast, sensitive and accurate integration of single-cell data with Harmony | Nature Methods
BatchBench – flexible comparison of batch correction methods for single-cell RNA-seq | RNA-Seq Blog
Input for batch-corrected data using Harmony · Issue #10 · neurorestore/Augur · GitHub
Batch correction using the Harmony algorithm. (A) Single cell UMAP... | Download Scientific Diagram
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
IJMS | Free Full-Text | IMGG: Integrating Multiple Single-Cell Datasets through Connected Graphs and Generative Adversarial Networks
6.3 Dimensionality Reduction After Harmony | ArchR: Robust and scaleable analysis of single-cell chromatin accessibility data.
Single-cell integration benchmarking
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
Are batch effects still relevant in the age of big data?: Trends in Biotechnology
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
Qualitative evaluation of 14 batch-effect correction methods using UMAP... | Download Scientific Diagram
36. Batch correction — Single-cell best practices
Benchmarking atlas-level data integration in single-cell genomics | Nature Methods
Harmony - Partek® Documentation
A benchmark of batch-effect correction methods for single-cell RNA sequencing data | Genome Biology | Full Text
Single-cell RNA-seq Workshop: <b style="font-size:45px;">Dataset alignment and batch correction</b>
Multi-batch cytometry data integration for optimal immunophenotyping | bioRxiv
Fast, Sensitive, and Accurate Integration of Single Cell Data • harmony
Fast, sensitive and accurate integration of single-cell data with Harmony | Nature Methods
about batch correction in scRNA-seq
Comparison of SAVERCAT with Seurat, Harmony and scVI in removing batch... | Download Scientific Diagram
Comparison of batch effect correction methods for the human... | Download Scientific Diagram
UMAPs before (a) and after batch correction using (b) Harmony, (c)... | Download Scientific Diagram
Fast, sensitive and accurate integration of single-cell data with Harmony | Nature Methods
